updated r_app/.gitignore to reflect install strategy.

removed renv and .Rprofile from project so every instance should run its own enviroment based on installPackages.R.

r_app/.Rprofile

@@ -1 +0,0 @@
-source("renv/activate.R")

r_app/.gitignore

@@ -2,6 +2,7 @@
 
 # Ignore renv binary cache
 renv/cache/
+renv
 
 # Ignore temporary files
 *.tmp
@@ -12,7 +13,7 @@ renv/cache/
 .Rproj.user/
 .Rhistory
 .RData
-
+.Rprofile
 # Ignore OSX files
 .DS_Store
 

r_app/installPackages.R

@@ -0,0 +1,15 @@
+install.packages('CAST')
+install.packages('CIprep')
+install.packages('caret')
+install.packages('exactextractr')
+install.packages('googledrive')
+install.packages('here')
+install.packages('lubridate')
+install.packages('raster')
+install.packages('readxl')
+install.packages('rsample')
+install.packages('sf')
+install.packages('terra')
+install.packages('tidyverse')
+install.packages('tmap')
+install.packages('zoo')

r_app/renv/.gitignore

@@ -1,7 +0,0 @@
-library/
-local/
-cellar/
-lock/
-python/
-sandbox/
-staging/

r_app/renv/settings.json

@@ -1,19 +0,0 @@
-{
-  "bioconductor.version": null,
-  "external.libraries": [],
-  "ignored.packages": [],
-  "package.dependency.fields": [
-    "Imports",
-    "Depends",
-    "LinkingTo"
-  ],
-  "ppm.enabled": null,
-  "ppm.ignored.urls": [],
-  "r.version": null,
-  "snapshot.type": "implicit",
-  "use.cache": true,
-  "vcs.ignore.cellar": true,
-  "vcs.ignore.library": true,
-  "vcs.ignore.local": true,
-  "vcs.manage.ignores": true
-}