removed chemba as a option from parameters so it is treathed as a regular project

laravel_app/app/Jobs/ProjectReportGeneratorJob.php

@@ -18,7 +18,7 @@ class ProjectReportGeneratorJob implements ShouldQueue
 {
     use Batchable, Dispatchable, InteractsWithQueue, Queueable, SerializesModels;
 
-    public $timeout = 220;
+    public $timeout = 600;
     private ProjectReport $projectReport;
     private bool $sendMail;
 
@@ -54,7 +54,7 @@ public function handle()
         // Convert commands array to a single string
 
         $process = new Process($command);
-        $process->setTimeout(220);
+        $process->setTimeout(600);
         $currentPath = '/usr/bin:/usr/gnu/bin:/usr/local/bin:/bin:/usr/bin/Users/mfolkerts/anaconda3/bin:/Library/Apple/usr/bin';
 
         $process->setEnv(['PATH' => $currentPath.':/usr/local/Cellar/pandoc/3.1.8/bin/pandoc']);

r_app/parameters_project.R

@@ -1,7 +1,7 @@
 
 library('readxl')
 #chemba
-if(project_dir == "chemba"){
+if(project_dir == "chemba1"){
   message("Yield data for Chemba")
 
   
@@ -89,8 +89,9 @@ if(project_dir == "chemba"){
   
 } else {
  field_boundaries_sf <- st_read(here(data_dir, "pivot.geojson"))
+ head(field_boundaries_sf)
    names(field_boundaries_sf) <- c("field", "sub_field", "geometry")
-   field_boundaries <- field_boundaries_sf %>% vect()
+   field_boundaries <- field_boundaries_sf %>% terra::vect()
    harvesting_data <- read_excel(here(data_dir, "harvest.xlsx")) %>%
    dplyr::select(c("field", "sub_field", "year", "season_start", "season_end", "age", "sub_area", "tonnage_ha")) %>%
        mutate(field = as.character(field),