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Timon 2026-02-03 14:56:04 +01:00
parent 14300f6832
commit 6efa6b6b05
2 changed files with 10 additions and 2 deletions
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8
r_app/10_create_per_field_tiffs.R
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@ -79,6 +79,14 @@ load_field_boundaries <- function(geojson_path) {
} }
} }
# FIX: Validate and repair geometries (handles duplicate vertices, degenerate edges, etc)
invalid_count <- sum(!st_is_valid(fields))
if (invalid_count > 0) {
smartcane_log(paste("WARNING: Found", invalid_count, "invalid geometry/geometries - attempting repair"))
fields <- st_make_valid(fields)
smartcane_log(paste("Repaired invalid geometries using st_make_valid()"))
}
smartcane_log(paste("Loaded", nrow(fields), "field(s)")) smartcane_log(paste("Loaded", nrow(fields), "field(s)"))
return(fields) return(fields)
} }

4
r_app/run_full_pipeline.R
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@ -30,8 +30,8 @@
# ============================================================================== # ==============================================================================
# *** EDIT THESE VARIABLES *** # *** EDIT THESE VARIABLES ***
end_date <- as.Date("2026-01-07") # or specify: as.Date("2026-01-27") , Sys.Date() end_date <- Sys.Date() # or specify: as.Date("2026-01-27") , Sys.Date()
project_dir <- "aura" # project name: "esa", "aura", "angata", "chemba" project_dir <- "angata" # project name: "esa", "aura", "angata", "chemba"
data_source <- "merged_tif" # Standard data source directory data_source <- "merged_tif" # Standard data source directory
force_rerun <- FALSE # Set to TRUE to force all scripts to run even if outputs exist force_rerun <- FALSE # Set to TRUE to force all scripts to run even if outputs exist
# *************************** # ***************************