From dda9ad8871a32362d3cc614b972cb8df0fd81c71 Mon Sep 17 00:00:00 2001
From: Martin Folkerts <m.folkerts@sobit.nl>
Date: Mon, 16 Oct 2023 17:20:46 +0200
Subject: [PATCH] build version of r.lock

---
 install.packages                   |    2 +
 r_app/packages/CIprep_0.1.4.tar.gz |  Bin 0 -> 12602 bytes
 r_app/renv.lock                    | 4640 ++++++++++++++++------------
 r_app/renv/activate.R              |    2 +-
 r_app/renv/settings.json           |   19 +
 smartcane.sh                       |    2 +-
 6 files changed, 2611 insertions(+), 2054 deletions(-)
 create mode 100644 install.packages
 create mode 100644 r_app/packages/CIprep_0.1.4.tar.gz
 create mode 100644 r_app/renv/settings.json

diff --git a/install.packages b/install.packages
new file mode 100644
index 0000000..8b24b96
--- /dev/null
+++ b/install.packages
@@ -0,0 +1,2 @@
+install.packages(c("googledrive", "here", "tidyverse", "lubridate", "readxl", "googlesheets4", "here", "sf", "tidyverse", "lubridate", "terra", "exactextractr")
+install.packages("packages/CIprep_0.1.4.tar.gz",repos=NULL, type="source")
diff --git a/r_app/packages/CIprep_0.1.4.tar.gz b/r_app/packages/CIprep_0.1.4.tar.gz
new file mode 100644
index 0000000000000000000000000000000000000000..07eda4022e6bf24edc83c01ee903c5c0cdd2a8cc
GIT binary patch
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diff --git a/r_app/renv.lock b/r_app/renv.lock
index d93c94d..ee6da0f 100644
--- a/r_app/renv.lock
+++ b/r_app/renv.lock
@@ -1,2052 +1,2588 @@
-{
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+        "cpp11"
+      ],
+      "Hash": "90b28393209827327de889f49935140a"
+    },
+    "terra": {
+      "Package": "terra",
+      "Version": "1.7-39",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "Rcpp",
+        "methods"
+      ],
+      "Hash": "6037d18193ca3f16900646e773937094"
+    },
+    "textshaping": {
+      "Package": "textshaping",
+      "Version": "0.3.6",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "cpp11",
+        "systemfonts"
+      ],
+      "Hash": "1ab6223d3670fac7143202cb6a2d43d5"
+    },
+    "tibble": {
+      "Package": "tibble",
+      "Version": "3.2.1",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "fansi",
+        "lifecycle",
+        "magrittr",
+        "methods",
+        "pillar",
+        "pkgconfig",
+        "rlang",
+        "utils",
+        "vctrs"
+      ],
+      "Hash": "a84e2cc86d07289b3b6f5069df7a004c"
+    },
+    "tidyr": {
+      "Package": "tidyr",
+      "Version": "1.3.0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "cli",
+        "cpp11",
+        "dplyr",
+        "glue",
+        "lifecycle",
+        "magrittr",
+        "purrr",
+        "rlang",
+        "stringr",
+        "tibble",
+        "tidyselect",
+        "utils",
+        "vctrs"
+      ],
+      "Hash": "e47debdc7ce599b070c8e78e8ac0cfcf"
+    },
+    "tidyselect": {
+      "Package": "tidyselect",
+      "Version": "1.2.0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "cli",
+        "glue",
+        "lifecycle",
+        "rlang",
+        "vctrs",
+        "withr"
+      ],
+      "Hash": "79540e5fcd9e0435af547d885f184fd5"
+    },
+    "tidyverse": {
+      "Package": "tidyverse",
+      "Version": "2.0.0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "broom",
+        "cli",
+        "conflicted",
+        "dbplyr",
+        "dplyr",
+        "dtplyr",
+        "forcats",
+        "ggplot2",
+        "googledrive",
+        "googlesheets4",
+        "haven",
+        "hms",
+        "httr",
+        "jsonlite",
+        "lubridate",
+        "magrittr",
+        "modelr",
+        "pillar",
+        "purrr",
+        "ragg",
+        "readr",
+        "readxl",
+        "reprex",
+        "rlang",
+        "rstudioapi",
+        "rvest",
+        "stringr",
+        "tibble",
+        "tidyr",
+        "xml2"
+      ],
+      "Hash": "c328568cd14ea89a83bd4ca7f54ae07e"
+    },
+    "timeDate": {
+      "Package": "timeDate",
+      "Version": "4022.108",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "graphics",
+        "methods",
+        "stats",
+        "utils"
+      ],
+      "Hash": "3f7918d2b36c17ffe07cddba6458453e"
+    },
+    "timechange": {
+      "Package": "timechange",
+      "Version": "0.2.0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "cpp11"
+      ],
+      "Hash": "8548b44f79a35ba1791308b61e6012d7"
+    },
+    "tinytex": {
+      "Package": "tinytex",
+      "Version": "0.45",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "xfun"
+      ],
+      "Hash": "e4e357f28c2edff493936b6cb30c3d65"
+    },
+    "tmap": {
+      "Package": "tmap",
+      "Version": "3.3-4",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "RColorBrewer",
+        "abind",
+        "classInt",
+        "grid",
+        "htmltools",
+        "htmlwidgets",
+        "leafem",
+        "leaflet",
+        "leafsync",
+        "methods",
+        "rlang",
+        "sf",
+        "stars",
+        "stats",
+        "tmaptools",
+        "units",
+        "utils",
+        "viridisLite",
+        "widgetframe"
+      ],
+      "Hash": "c65363bc002492caf754352499ce2386"
+    },
+    "tmaptools": {
+      "Package": "tmaptools",
+      "Version": "3.1-1",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "RColorBrewer",
+        "XML",
+        "dichromat",
+        "grid",
+        "lwgeom",
+        "magrittr",
+        "methods",
+        "sf",
+        "stars",
+        "stats",
+        "units",
+        "viridisLite"
+      ],
+      "Hash": "dfcb77371df343b663d6668d2d63ac35"
+    },
+    "tzdb": {
+      "Package": "tzdb",
+      "Version": "0.4.0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "cpp11"
+      ],
+      "Hash": "f561504ec2897f4d46f0c7657e488ae1"
+    },
+    "units": {
+      "Package": "units",
+      "Version": "0.8-2",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "Rcpp"
+      ],
+      "Hash": "422376fe53419adcde4710d43acbcdd0"
+    },
+    "utf8": {
+      "Package": "utf8",
+      "Version": "1.2.3",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R"
+      ],
+      "Hash": "1fe17157424bb09c48a8b3b550c753bc"
+    },
+    "uuid": {
+      "Package": "uuid",
+      "Version": "1.1-0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R"
+      ],
+      "Hash": "f1cb46c157d080b729159d407be83496"
+    },
+    "vctrs": {
+      "Package": "vctrs",
+      "Version": "0.6.3",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "cli",
+        "glue",
+        "lifecycle",
+        "rlang"
+      ],
+      "Hash": "d0ef2856b83dc33ea6e255caf6229ee2"
+    },
+    "viridis": {
+      "Package": "viridis",
+      "Version": "0.6.4",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "ggplot2",
+        "gridExtra",
+        "viridisLite"
+      ],
+      "Hash": "80cd127bc8c9d3d9f0904ead9a9102f1"
+    },
+    "viridisLite": {
+      "Package": "viridisLite",
+      "Version": "0.4.2",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R"
+      ],
+      "Hash": "c826c7c4241b6fc89ff55aaea3fa7491"
+    },
+    "vroom": {
+      "Package": "vroom",
+      "Version": "1.6.3",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "bit64",
+        "cli",
+        "cpp11",
+        "crayon",
+        "glue",
+        "hms",
+        "lifecycle",
+        "methods",
+        "progress",
+        "rlang",
+        "stats",
+        "tibble",
+        "tidyselect",
+        "tzdb",
+        "vctrs",
+        "withr"
+      ],
+      "Hash": "8318e64ffb3a70e652494017ec455561"
+    },
+    "warp": {
+      "Package": "warp",
+      "Version": "0.2.0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R"
+      ],
+      "Hash": "2982481615756e24e79fee95bdc95daa"
+    },
+    "widgetframe": {
+      "Package": "widgetframe",
+      "Version": "0.3.1",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "htmltools",
+        "htmlwidgets",
+        "magrittr",
+        "purrr",
+        "tools",
+        "utils"
+      ],
+      "Hash": "0ee89e6cb58182d39b30a5b506e04808"
+    },
+    "withr": {
+      "Package": "withr",
+      "Version": "2.5.0",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "grDevices",
+        "graphics",
+        "stats"
+      ],
+      "Hash": "c0e49a9760983e81e55cdd9be92e7182"
+    },
+    "wk": {
+      "Package": "wk",
+      "Version": "0.7.3",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R"
+      ],
+      "Hash": "68a7ab6ec1afb5f076172b983c069313"
+    },
+    "xfun": {
+      "Package": "xfun",
+      "Version": "0.39",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "stats",
+        "tools"
+      ],
+      "Hash": "8f56e9acb54fb525e66464d57ab58bcb"
+    },
+    "xml2": {
+      "Package": "xml2",
+      "Version": "1.3.5",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "methods"
+      ],
+      "Hash": "6c40e5cfcc6aefd88110666e18c31f40"
+    },
+    "yaml": {
+      "Package": "yaml",
+      "Version": "2.3.7",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Hash": "0d0056cc5383fbc240ccd0cb584bf436"
+    },
+    "zoo": {
+      "Package": "zoo",
+      "Version": "1.8-12",
+      "Source": "Repository",
+      "Repository": "CRAN",
+      "Requirements": [
+        "R",
+        "grDevices",
+        "graphics",
+        "lattice",
+        "stats",
+        "utils"
+      ],
+      "Hash": "5c715954112b45499fb1dadc6ee6ee3e"
+    }
+  }
+}
diff --git a/r_app/renv/activate.R b/r_app/renv/activate.R
index c5d5405..cb5401f 100644
--- a/r_app/renv/activate.R
+++ b/r_app/renv/activate.R
@@ -2,7 +2,7 @@
 local({
 
   # the requested version of renv
-  version <- "0.17.3"
+  version <- "1.0.3"
   attr(version, "sha") <- NULL
 
   # the project directory
diff --git a/r_app/renv/settings.json b/r_app/renv/settings.json
new file mode 100644
index 0000000..ffdbb32
--- /dev/null
+++ b/r_app/renv/settings.json
@@ -0,0 +1,19 @@
+{
+  "bioconductor.version": null,
+  "external.libraries": [],
+  "ignored.packages": [],
+  "package.dependency.fields": [
+    "Imports",
+    "Depends",
+    "LinkingTo"
+  ],
+  "ppm.enabled": null,
+  "ppm.ignored.urls": [],
+  "r.version": null,
+  "snapshot.type": "implicit",
+  "use.cache": true,
+  "vcs.ignore.cellar": true,
+  "vcs.ignore.library": true,
+  "vcs.ignore.local": true,
+  "vcs.manage.ignores": true
+}
diff --git a/smartcane.sh b/smartcane.sh
index 52b6a09..96d74e4 100755
--- a/smartcane.sh
+++ b/smartcane.sh
@@ -38,7 +38,7 @@ fi
 source "$VENV_DIR/bin/activate"
 
 # Installeer of update de benodigde pakketten
-if [ -f "requirements.txt" ]; then
+if [ -f "python_app/requirements.txt" ]; then
     echo "Requirements aan het installeren of bijwerken..."
     pip install --upgrade -r python_app/requirements.txt
 else