From f04f5d83b76abab8f48390f55537c77e9515bb3d Mon Sep 17 00:00:00 2001 From: Timon Date: Thu, 19 Feb 2026 10:51:38 +0100 Subject: [PATCH] updated renv.lock --- renv.lock | 1003 +++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 1003 insertions(+) diff --git a/renv.lock b/renv.lock index 9e78b85..9304e90 100644 --- a/renv.lock +++ b/renv.lock @@ -9,6 +9,71 @@ ] }, "Packages": { + "CAST": { + "Package": "CAST", + "Version": "1.0.3", + "Source": "Repository", + "Type": "Package", + "Title": "'caret' Applications for Spatial-Temporal Models", + "Authors@R": "c(person(\"Hanna\", \"Meyer\", email = \"hanna.meyer@uni-muenster.de\", role = c(\"cre\", \"aut\")), person(\"Carles\", \"Milà\", role = c(\"aut\")), person(\"Marvin\", \"Ludwig\", role = c(\"aut\")), person(\"Jan\", \"Linnenbrink\", role = c(\"aut\")), person(\"Fabian\", \"Schumacher\", role = c(\"aut\")), person(\"Philipp\", \"Otto\", role = c(\"ctb\")), person(\"Chris\", \"Reudenbach\", role = c(\"ctb\")), person(\"Thomas\", \"Nauss\", role = c(\"ctb\")), person(\"Edzer\", \"Pebesma\", role = c(\"ctb\")), person(\"Jakub\", \"Nowosad\", role = c(\"ctb\")))", + "Author": "Hanna Meyer [cre, aut], Carles Milà [aut], Marvin Ludwig [aut], Jan Linnenbrink [aut], Fabian Schumacher [aut], Philipp Otto [ctb], Chris Reudenbach [ctb], Thomas Nauss [ctb], Edzer Pebesma [ctb], Jakub Nowosad [ctb]", + "Maintainer": "Hanna Meyer ", + "Description": "Supporting functionality to run 'caret' with spatial or spatial-temporal data. 'caret' is a frequently used package for model training and prediction using machine learning. CAST includes functions to improve spatial or spatial-temporal modelling tasks using 'caret'. It includes the newly suggested 'Nearest neighbor distance matching' cross-validation to estimate the performance of spatial prediction models and allows for spatial variable selection to selects suitable predictor variables in view to their contribution to the spatial model performance. CAST further includes functionality to estimate the (spatial) area of applicability of prediction models. Methods are described in Meyer et al. (2018) ; Meyer et al. (2019) ; Meyer and Pebesma (2021) ; Milà et al. (2022) ; Meyer and Pebesma (2022) ; Linnenbrink et al. (2023) ; Schumacher et al. (2024) . The package is described in detail in Meyer et al. (2024) .", + "License": "GPL (>= 2)", + "URL": "https://github.com/HannaMeyer/CAST, https://hannameyer.github.io/CAST/", + "Encoding": "UTF-8", + "LazyData": "false", + "Depends": [ + "R (>= 4.1.0)" + ], + "BugReports": "https://github.com/HannaMeyer/CAST/issues/", + "Imports": [ + "caret", + "stats", + "utils", + "ggplot2", + "graphics", + "FNN", + "plyr", + "zoo", + "methods", + "grDevices", + "data.table", + "sf", + "forcats", + "twosamples", + "terra", + "sp" + ], + "Suggests": [ + "doParallel", + "lubridate", + "randomForest", + "knitr", + "geodata", + "mapview", + "rmarkdown", + "scales", + "parallel", + "gridExtra", + "viridis", + "stars", + "scam", + "rnaturalearth", + "MASS", + "RColorBrewer", + "tmap", + "PCAmixdata", + "gower", + "clustMixType", + "testthat (>= 3.0.0)" + ], + "RoxygenNote": "7.3.2", + "VignetteBuilder": "knitr", + "Config/testthat/edition": "3", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, "DBI": { "Package": "DBI", "Version": "1.2.3", @@ -58,6 +123,28 @@ "Maintainer": "Kirill Müller ", "Repository": "CRAN" }, + "FNN": { + "Package": "FNN", + "Version": "1.1.4.1", + "Source": "Repository", + "Date": "2023-12-31", + "Title": "Fast Nearest Neighbor Search Algorithms and Applications", + "Authors@R": "c(person(\"Alina\", \"Beygelzimer\", role = \"aut\", comment = \"cover tree library\"), person(\"Sham\", \"Kakadet\", role = \"aut\", comment = \"cover tree library\"), person(\"John\", \"Langford\", role = \"aut\", comment = \"cover tree library\"), person(\"Sunil\", \"Arya\", role = \"aut\", comment = \"ANN library 1.1.2 for the kd-tree approach\"), person(\"David\", \"Mount\", role = \"aut\", comment = \"ANN library 1.1.2 for the kd-tree approach\"), person(\"Shengqiao\", \"Li\", role = c(\"aut\", \"cre\"), email = \"lishengqiao@yahoo.com\"))", + "Copyright": "ANN Copyright (c) 1997-2010 University of Maryland and Sunil Arya and David Mount. All Rights Reserved.", + "Depends": [ + "R (>= 4.0.0)" + ], + "Suggests": [ + "chemometrics", + "mvtnorm" + ], + "Description": "Cover-tree and kd-tree fast k-nearest neighbor search algorithms and related applications including KNN classification, regression and information measures are implemented.", + "License": "GPL (>= 2)", + "NeedsCompilation": "yes", + "Repository": "CRAN", + "Author": "Alina Beygelzimer [aut] (cover tree library), Sham Kakadet [aut] (cover tree library), John Langford [aut] (cover tree library), Sunil Arya [aut] (ANN library 1.1.2 for the kd-tree approach), David Mount [aut] (ANN library 1.1.2 for the kd-tree approach), Shengqiao Li [aut, cre]", + "Maintainer": "Shengqiao Li " + }, "KernSmooth": { "Package": "KernSmooth", "Version": "2.23-24", @@ -164,6 +251,36 @@ "Maintainer": "Martin Maechler ", "Repository": "CRAN" }, + "ModelMetrics": { + "Package": "ModelMetrics", + "Version": "1.2.2.2", + "Source": "Repository", + "Title": "Rapid Calculation of Model Metrics", + "Date": "2018-11-03", + "Authors@R": "person(\"Tyler\", \"Hunt\", email = \"thunt@snapfinance.com\", role = c(\"aut\", \"cre\"))", + "Description": "Collection of metrics for evaluating models written in C++ using 'Rcpp'. Popular metrics include area under the curve, log loss, root mean square error, etc.", + "Depends": [ + "R (>= 3.2.2)" + ], + "License": "GPL (>= 2)", + "Encoding": "UTF-8", + "LazyData": "true", + "LinkingTo": [ + "Rcpp" + ], + "Imports": [ + "Rcpp", + "data.table" + ], + "RoxygenNote": "6.0.1", + "Suggests": [ + "testthat" + ], + "NeedsCompilation": "yes", + "Author": "Tyler Hunt [aut, cre]", + "Maintainer": "Tyler Hunt ", + "Repository": "CRAN" + }, "R6": { "Package": "R6", "Version": "2.6.1", @@ -236,6 +353,27 @@ "Maintainer": "Dirk Eddelbuettel ", "Repository": "CRAN" }, + "SQUAREM": { + "Package": "SQUAREM", + "Version": "2021.1", + "Source": "Repository", + "Date": "2021-01-12", + "Title": "Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms", + "Description": "Algorithms for accelerating the convergence of slow, monotone sequences from smooth, contraction mapping such as the EM algorithm. It can be used to accelerate any smooth, linearly convergent acceleration scheme. A tutorial style introduction to this package is available in a vignette on the CRAN download page or, when the package is loaded in an R session, with vignette(\"SQUAREM\"). Refer to the J Stat Software article: .", + "Depends": [ + "R (>= 3.0)" + ], + "Suggests": [ + "setRNG" + ], + "LazyLoad": "yes", + "License": "GPL (>= 2)", + "Author": "Ravi Varadhan", + "Maintainer": "Ravi Varadhan ", + "URL": "https://coah.jhu.edu/people/Faculty_personal_Pages/Varadhan.html", + "Repository": "CRAN", + "NeedsCompilation": "no" + }, "XML": { "Package": "XML", "Version": "3.99-0.18", @@ -717,6 +855,78 @@ "Maintainer": "Gábor Csárdi ", "Repository": "CRAN" }, + "caret": { + "Package": "caret", + "Version": "7.0-1", + "Source": "Repository", + "Title": "Classification and Regression Training", + "Authors@R": "c(person(given = \"Max\", family = \"Kuhn\", role = c(\"aut\", \"cre\"), email = \"mxkuhn@gmail.com\", comment = c(ORCID = \"0000-0003-2402-136X\")), person(given = \"Jed\", family = \"Wing\", role = \"ctb\"), person(given = \"Steve\", family = \"Weston\", role = \"ctb\"), person(given = \"Andre\", family = \"Williams\", role = \"ctb\"), person(given = \"Chris\", family = \"Keefer\", role = \"ctb\"), person(given = \"Allan\", family = \"Engelhardt\", role = \"ctb\"), person(given = \"Tony\", family = \"Cooper\", role = \"ctb\"), person(given = \"Zachary\", family = \"Mayer\", role = \"ctb\"), person(given = \"Brenton\", family = \"Kenkel\", role = \"ctb\"), person(given = \"R Core Team\", role = \"ctb\"), person(given = \"Michael\", family = \"Benesty\", role = \"ctb\"), person(given = \"Reynald\", family = \"Lescarbeau\", role = \"ctb\"), person(given = \"Andrew\", family = \"Ziem\", role = \"ctb\"), person(given = \"Luca\", family = \"Scrucca\", role = \"ctb\"), person(given = \"Yuan\", family = \"Tang\", role = \"ctb\"), person(given = \"Can\", family = \"Candan\", role = \"ctb\"), person(given = \"Tyler\", family = \"Hunt\", role = \"ctb\"))", + "Description": "Misc functions for training and plotting classification and regression models.", + "License": "GPL (>= 2)", + "URL": "https://github.com/topepo/caret/", + "BugReports": "https://github.com/topepo/caret/issues", + "Depends": [ + "ggplot2", + "lattice (>= 0.20)", + "R (>= 3.2.0)" + ], + "Imports": [ + "e1071", + "foreach", + "grDevices", + "methods", + "ModelMetrics (>= 1.2.2.2)", + "nlme", + "plyr", + "pROC", + "recipes (>= 0.1.10)", + "reshape2", + "stats", + "stats4", + "utils", + "withr (>= 2.0.0)" + ], + "Suggests": [ + "BradleyTerry2", + "covr", + "Cubist", + "dplyr", + "earth (>= 2.2-3)", + "ellipse", + "fastICA", + "gam (>= 1.15)", + "ipred", + "kernlab", + "klaR", + "knitr", + "MASS", + "Matrix", + "mda", + "mgcv", + "mlbench", + "MLmetrics", + "nnet", + "pamr", + "party (>= 0.9-99992)", + "pls", + "proxy", + "randomForest", + "RANN", + "rmarkdown", + "rpart", + "spls", + "superpc", + "testthat (>= 0.9.1)", + "themis (>= 0.1.3)" + ], + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "Max Kuhn [aut, cre] (), Jed Wing [ctb], Steve Weston [ctb], Andre Williams [ctb], Chris Keefer [ctb], Allan Engelhardt [ctb], Tony Cooper [ctb], Zachary Mayer [ctb], Brenton Kenkel [ctb], R Core Team [ctb], Michael Benesty [ctb], Reynald Lescarbeau [ctb], Andrew Ziem [ctb], Luca Scrucca [ctb], Yuan Tang [ctb], Can Candan [ctb], Tyler Hunt [ctb]", + "Maintainer": "Max Kuhn ", + "Repository": "CRAN" + }, "cellranger": { "Package": "cellranger", "Version": "1.1.0", @@ -888,6 +1098,52 @@ "Maintainer": "Matthew Lincoln ", "Repository": "CRAN" }, + "clock": { + "Package": "clock", + "Version": "0.7.3", + "Source": "Repository", + "Title": "Date-Time Types and Tools", + "Authors@R": "c( person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "Provides a comprehensive library for date-time manipulations using a new family of orthogonal date-time classes (durations, time points, zoned-times, and calendars) that partition responsibilities so that the complexities of time zones are only considered when they are really needed. Capabilities include: date-time parsing, formatting, arithmetic, extraction and updating of components, and rounding.", + "License": "MIT + file LICENSE", + "URL": "https://clock.r-lib.org, https://github.com/r-lib/clock", + "BugReports": "https://github.com/r-lib/clock/issues", + "Depends": [ + "R (>= 4.0.0)" + ], + "Imports": [ + "cli (>= 3.6.4)", + "lifecycle (>= 1.0.4)", + "rlang (>= 1.1.5)", + "tzdb (>= 0.5.0)", + "vctrs (>= 0.6.5)" + ], + "Suggests": [ + "covr", + "knitr", + "magrittr", + "pillar", + "rmarkdown", + "slider (>= 0.3.2)", + "testthat (>= 3.0.0)", + "withr" + ], + "LinkingTo": [ + "cpp11 (>= 0.5.2)", + "tzdb (>= 0.5.0)" + ], + "VignetteBuilder": "knitr", + "Config/build/compilation-database": "true", + "Config/Needs/website": "lubridate, tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "Davis Vaughan [aut, cre], Posit Software, PBC [cph, fnd]", + "Maintainer": "Davis Vaughan ", + "Repository": "CRAN" + }, "codetools": { "Package": "codetools", "Version": "0.2-20", @@ -1328,6 +1584,27 @@ "NeedsCompilation": "yes", "Repository": "CRAN" }, + "diagram": { + "Package": "diagram", + "Version": "1.6.5", + "Source": "Repository", + "Title": "Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams", + "Author": "Karline Soetaert ", + "Maintainer": "Karline Soetaert ", + "Depends": [ + "R (>= 2.01)", + "shape" + ], + "Imports": [ + "stats", + "graphics" + ], + "Description": "Visualises simple graphs (networks) based on a transition matrix, utilities to plot flow diagrams, visualising webs, electrical networks, etc. Support for the book \"A practical guide to ecological modelling - using R as a simulation platform\" by Karline Soetaert and Peter M.J. Herman (2009), Springer. and the book \"Solving Differential Equations in R\" by Karline Soetaert, Jeff Cash and Francesca Mazzia (2012), Springer. Includes demo(flowchart), demo(plotmat), demo(plotweb).", + "License": "GPL (>= 2)", + "LazyData": "yes", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, "dichromat": { "Package": "dichromat", "Version": "2.0-0.1", @@ -1832,6 +2109,41 @@ "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, + "foreach": { + "Package": "foreach", + "Version": "1.5.2", + "Source": "Repository", + "Type": "Package", + "Title": "Provides Foreach Looping Construct", + "Authors@R": "c(person(\"Folashade\", \"Daniel\", role=\"cre\", email=\"fdaniel@microsoft.com\"), person(\"Hong\", \"Ooi\", role=\"ctb\"), person(\"Rich\", \"Calaway\", role=\"ctb\"), person(\"Microsoft\", role=c(\"aut\", \"cph\")), person(\"Steve\", \"Weston\", role=\"aut\"))", + "Description": "Support for the foreach looping construct. Foreach is an idiom that allows for iterating over elements in a collection, without the use of an explicit loop counter. This package in particular is intended to be used for its return value, rather than for its side effects. In that sense, it is similar to the standard lapply function, but doesn't require the evaluation of a function. Using foreach without side effects also facilitates executing the loop in parallel.", + "License": "Apache License (== 2.0)", + "URL": "https://github.com/RevolutionAnalytics/foreach", + "BugReports": "https://github.com/RevolutionAnalytics/foreach/issues", + "Depends": [ + "R (>= 2.5.0)" + ], + "Imports": [ + "codetools", + "utils", + "iterators" + ], + "Suggests": [ + "randomForest", + "doMC", + "doParallel", + "testthat", + "knitr", + "rmarkdown" + ], + "VignetteBuilder": "knitr", + "RoxygenNote": "7.1.1", + "Collate": "'callCombine.R' 'foreach.R' 'do.R' 'foreach-ext.R' 'foreach-pkg.R' 'getDoPar.R' 'getDoSeq.R' 'getsyms.R' 'iter.R' 'nextElem.R' 'onLoad.R' 'setDoPar.R' 'setDoSeq.R' 'times.R' 'utils.R'", + "NeedsCompilation": "no", + "Author": "Folashade Daniel [cre], Hong Ooi [ctb], Rich Calaway [ctb], Microsoft [aut, cph], Steve Weston [aut]", + "Maintainer": "Folashade Daniel ", + "Repository": "CRAN" + }, "fs": { "Package": "fs", "Version": "1.6.5", @@ -1953,6 +2265,41 @@ "Maintainer": "Henrik Bengtsson ", "Repository": "CRAN" }, + "future.apply": { + "Package": "future.apply", + "Version": "1.11.3", + "Source": "Repository", + "Title": "Apply Function to Elements in Parallel using Futures", + "Depends": [ + "R (>= 3.2.0)", + "future (>= 1.28.0)" + ], + "Imports": [ + "globals (>= 0.16.1)", + "parallel", + "utils" + ], + "Suggests": [ + "datasets", + "stats", + "tools", + "listenv (>= 0.8.0)", + "R.rsp", + "markdown" + ], + "VignetteBuilder": "R.rsp", + "Authors@R": "c(person(\"Henrik\", \"Bengtsson\", role = c(\"aut\", \"cre\", \"cph\"), email = \"henrikb@braju.com\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"R Core Team\", role = c(\"cph\", \"ctb\")))", + "Description": "Implementations of apply(), by(), eapply(), lapply(), Map(), .mapply(), mapply(), replicate(), sapply(), tapply(), and vapply() that can be resolved using any future-supported backend, e.g. parallel on the local machine or distributed on a compute cluster. These future_*apply() functions come with the same pros and cons as the corresponding base-R *apply() functions but with the additional feature of being able to be processed via the future framework .", + "License": "GPL (>= 2)", + "LazyLoad": "TRUE", + "URL": "https://future.apply.futureverse.org, https://github.com/futureverse/future.apply", + "BugReports": "https://github.com/futureverse/future.apply/issues", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "no", + "Author": "Henrik Bengtsson [aut, cre, cph] (), R Core Team [cph, ctb]", + "Maintainer": "Henrik Bengtsson ", + "Repository": "CRAN" + }, "gargle": { "Package": "gargle", "Version": "1.5.2", @@ -2430,6 +2777,27 @@ "Maintainer": "Jennifer Bryan ", "Repository": "CRAN" }, + "gower": { + "Package": "gower", + "Version": "1.0.2", + "Source": "Repository", + "Maintainer": "Mark van der Loo ", + "License": "GPL-3", + "Title": "Gower's Distance", + "Type": "Package", + "LazyLoad": "yes", + "Authors@R": "c( person(\"Mark\", \"van der Loo\", role=c(\"aut\",\"cre\"),email=\"mark.vanderloo@gmail.com\") , person(\"David\", \"Turner\", role=\"ctb\"))", + "Description": "Compute Gower's distance (or similarity) coefficient between records. Compute the top-n matches between records. Core algorithms are executed in parallel on systems supporting OpenMP.", + "URL": "https://github.com/markvanderloo/gower", + "BugReports": "https://github.com/markvanderloo/gower/issues", + "Suggests": [ + "tinytest (>= 0.9.3)" + ], + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "Mark van der Loo [aut, cre], David Turner [ctb]", + "Repository": "CRAN" + }, "gtable": { "Package": "gtable", "Version": "0.3.6", @@ -2470,6 +2838,52 @@ "Maintainer": "Thomas Lin Pedersen ", "Repository": "CRAN" }, + "hardhat": { + "Package": "hardhat", + "Version": "1.4.1", + "Source": "Repository", + "Title": "Construct Modeling Packages", + "Authors@R": "c( person(\"Hannah\", \"Frick\", , \"hannah@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6049-5258\")), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = \"aut\"), person(\"Max\", \"Kuhn\", , \"max@posit.co\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "Building modeling packages is hard. A large amount of effort generally goes into providing an implementation for a new method that is efficient, fast, and correct, but often less emphasis is put on the user interface. A good interface requires specialized knowledge about S3 methods and formulas, which the average package developer might not have. The goal of 'hardhat' is to reduce the burden around building new modeling packages by providing functionality for preprocessing, predicting, and validating input.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/tidymodels/hardhat, https://hardhat.tidymodels.org", + "BugReports": "https://github.com/tidymodels/hardhat/issues", + "Depends": [ + "R (>= 3.5.0)" + ], + "Imports": [ + "cli (>= 3.6.0)", + "glue (>= 1.6.2)", + "rlang (>= 1.1.0)", + "sparsevctrs (>= 0.2.0)", + "tibble (>= 3.2.1)", + "vctrs (>= 0.6.0)" + ], + "Suggests": [ + "covr", + "crayon", + "devtools", + "knitr", + "Matrix", + "modeldata (>= 0.0.2)", + "recipes (>= 1.0.5)", + "rmarkdown (>= 2.3)", + "roxygen2", + "testthat (>= 3.0.0)", + "usethis (>= 2.1.5)", + "withr (>= 3.0.0)" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "no", + "Author": "Hannah Frick [aut, cre] (), Davis Vaughan [aut], Max Kuhn [aut], Posit Software, PBC [cph, fnd]", + "Maintainer": "Hannah Frick ", + "Repository": "CRAN" + }, "haven": { "Package": "haven", "Version": "2.5.4", @@ -2841,6 +3255,38 @@ "Maintainer": "Rich FitzJohn ", "Repository": "CRAN" }, + "ipred": { + "Package": "ipred", + "Version": "0.9-15", + "Source": "Repository", + "Title": "Improved Predictors", + "Date": "2024-07-18", + "Authors@R": "c(person(\"Andrea\", \"Peters\", role = \"aut\"), person(\"Torsten\", \"Hothorn\", role = c(\"aut\", \"cre\"), email = \"Torsten.Hothorn@R-project.org\"), person(\"Brian D.\", \"Ripley\", role = \"ctb\"), person(\"Terry\", \"Therneau\", role = \"ctb\"), person(\"Beth\", \"Atkinson\", role = \"ctb\"))", + "Description": "Improved predictive models by indirect classification and bagging for classification, regression and survival problems as well as resampling based estimators of prediction error.", + "Depends": [ + "R (>= 2.10)" + ], + "Imports": [ + "rpart (>= 3.1-8)", + "MASS", + "survival", + "nnet", + "class", + "prodlim" + ], + "Suggests": [ + "mvtnorm", + "mlbench", + "TH.data", + "randomForest", + "party" + ], + "License": "GPL (>= 2)", + "NeedsCompilation": "yes", + "Author": "Andrea Peters [aut], Torsten Hothorn [aut, cre], Brian D. Ripley [ctb], Terry Therneau [ctb], Beth Atkinson [ctb]", + "Maintainer": "Torsten Hothorn ", + "Repository": "CRAN" + }, "isoband": { "Package": "isoband", "Version": "0.2.7", @@ -2877,6 +3323,29 @@ "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, + "iterators": { + "Package": "iterators", + "Version": "1.0.14", + "Source": "Repository", + "Type": "Package", + "Title": "Provides Iterator Construct", + "Authors@R": "c(person(\"Folashade\", \"Daniel\", role=\"cre\", email=\"fdaniel@microsoft.com\"), person(\"Revolution\", \"Analytics\", role=c(\"aut\", \"cph\")), person(\"Steve\", \"Weston\", role=\"aut\"))", + "Description": "Support for iterators, which allow a programmer to traverse through all the elements of a vector, list, or other collection of data.", + "URL": "https://github.com/RevolutionAnalytics/iterators", + "Depends": [ + "R (>= 2.5.0)", + "utils" + ], + "Suggests": [ + "RUnit", + "foreach" + ], + "License": "Apache License (== 2.0)", + "NeedsCompilation": "no", + "Author": "Folashade Daniel [cre], Revolution Analytics [aut, cph], Steve Weston [aut]", + "Maintainer": "Folashade Daniel ", + "Repository": "CRAN" + }, "jpeg": { "Package": "jpeg", "Version": "0.1-11", @@ -3139,6 +3608,68 @@ "Maintainer": "Deepayan Sarkar ", "Repository": "CRAN" }, + "lava": { + "Package": "lava", + "Version": "1.8.1", + "Source": "Repository", + "Type": "Package", + "Title": "Latent Variable Models", + "Authors@R": "c(person(\"Klaus K.\", \"Holst\", email=\"klaus@holst.it\", role=c(\"aut\", \"cre\")), person(\"Brice\", \"Ozenne\", role = \"ctb\"), person(\"Thomas\", \"Gerds\", role = \"ctb\"))", + "Author": "Klaus K. Holst [aut, cre], Brice Ozenne [ctb], Thomas Gerds [ctb]", + "Maintainer": "Klaus K. Holst ", + "Description": "A general implementation of Structural Equation Models with latent variables (MLE, 2SLS, and composite likelihood estimators) with both continuous, censored, and ordinal outcomes (Holst and Budtz-Joergensen (2013) ). Mixture latent variable models and non-linear latent variable models (Holst and Budtz-Joergensen (2020) ). The package also provides methods for graph exploration (d-separation, back-door criterion), simulation of general non-linear latent variable models, and estimation of influence functions for a broad range of statistical models.", + "URL": "https://kkholst.github.io/lava/", + "BugReports": "https://github.com/kkholst/lava/issues", + "License": "GPL-3", + "LazyLoad": "yes", + "Depends": [ + "R (>= 3.0)" + ], + "Imports": [ + "cli", + "future.apply", + "graphics", + "grDevices", + "methods", + "numDeriv", + "progressr", + "stats", + "survival", + "SQUAREM", + "utils" + ], + "Suggests": [ + "KernSmooth", + "Rgraphviz", + "data.table", + "ellipse", + "fields", + "geepack", + "graph", + "knitr", + "rmarkdown", + "igraph (>= 0.6)", + "lavaSearch2", + "lme4 (>= 1.1.35.1)", + "MASS", + "Matrix (>= 1.6.3)", + "mets (>= 1.1)", + "nlme", + "optimx", + "polycor", + "quantreg", + "rgl", + "targeted (>= 0.4)", + "testthat (>= 0.11)", + "visNetwork" + ], + "VignetteBuilder": "knitr,rmarkdown", + "ByteCompile": "yes", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, "lazyeval": { "Package": "lazyeval", "Version": "0.2.2", @@ -3800,6 +4331,50 @@ "Maintainer": "R Core Team ", "Repository": "CRAN" }, + "nnet": { + "Package": "nnet", + "Version": "7.3-19", + "Source": "Repository", + "Priority": "recommended", + "Date": "2023-05-02", + "Depends": [ + "R (>= 3.0.0)", + "stats", + "utils" + ], + "Suggests": [ + "MASS" + ], + "Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"ripley@stats.ox.ac.uk\"), person(\"William\", \"Venables\", role = \"cph\"))", + "Description": "Software for feed-forward neural networks with a single hidden layer, and for multinomial log-linear models.", + "Title": "Feed-Forward Neural Networks and Multinomial Log-Linear Models", + "ByteCompile": "yes", + "License": "GPL-2 | GPL-3", + "URL": "http://www.stats.ox.ac.uk/pub/MASS4/", + "NeedsCompilation": "yes", + "Author": "Brian Ripley [aut, cre, cph], William Venables [cph]", + "Maintainer": "Brian Ripley ", + "Repository": "CRAN" + }, + "numDeriv": { + "Package": "numDeriv", + "Version": "2016.8-1.1", + "Source": "Repository", + "Title": "Accurate Numerical Derivatives", + "Description": "Methods for calculating (usually) accurate numerical first and second order derivatives. Accurate calculations are done using 'Richardson''s' extrapolation or, when applicable, a complex step derivative is available. A simple difference method is also provided. Simple difference is (usually) less accurate but is much quicker than 'Richardson''s' extrapolation and provides a useful cross-check. Methods are provided for real scalar and vector valued functions.", + "Depends": [ + "R (>= 2.11.1)" + ], + "LazyLoad": "yes", + "ByteCompile": "yes", + "License": "GPL-2", + "Copyright": "2006-2011, Bank of Canada. 2012-2016, Paul Gilbert", + "Author": "Paul Gilbert and Ravi Varadhan", + "Maintainer": "Paul Gilbert ", + "URL": "http://optimizer.r-forge.r-project.org/", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, "officer": { "Package": "officer", "Version": "0.7.0", @@ -3877,6 +4452,47 @@ "Maintainer": "Jeroen Ooms ", "Repository": "CRAN" }, + "pROC": { + "Package": "pROC", + "Version": "1.18.5", + "Source": "Repository", + "Type": "Package", + "Title": "Display and Analyze ROC Curves", + "Date": "2023-11-01", + "Encoding": "UTF-8", + "Depends": [ + "R (>= 2.14)" + ], + "Imports": [ + "methods", + "plyr", + "Rcpp (>= 0.11.1)" + ], + "Suggests": [ + "microbenchmark", + "tcltk", + "MASS", + "logcondens", + "doParallel", + "testthat", + "vdiffr", + "ggplot2", + "rlang" + ], + "LinkingTo": [ + "Rcpp" + ], + "Authors@R": "c(person(\"Xavier\", \"Robin\", role = c(\"cre\", \"aut\"), email = \"pROC-cran@xavier.robin.name\", comment = c(ORCID = \"0000-0002-6813-3200\")), person(\"Natacha\", \"Turck\", role = \"aut\"), person(\"Alexandre\", \"Hainard\", role = \"aut\"), person(\"Natalia\", \"Tiberti\", role = \"aut\"), person(\"Frédérique\", \"Lisacek\", role = \"aut\"), person(\"Jean-Charles\", \"Sanchez\", role = \"aut\"), person(\"Markus\", \"Müller\", role = \"aut\"), person(\"Stefan\", \"Siegert\", role = \"ctb\", comment = \"Fast DeLong code\", email = \"stefan_siegert@gmx.de\"), person(\"Matthias\", \"Doering\", role = \"ctb\", comment = \"Hand & Till Multiclass\"), person(\"Zane\", \"Billings\", role = \"ctb\", comment = \"DeLong paired test CI\"))", + "Description": "Tools for visualizing, smoothing and comparing receiver operating characteristic (ROC curves). (Partial) area under the curve (AUC) can be compared with statistical tests based on U-statistics or bootstrap. Confidence intervals can be computed for (p)AUC or ROC curves.", + "License": "GPL (>= 3)", + "URL": "https://xrobin.github.io/pROC/", + "BugReports": "https://github.com/xrobin/pROC/issues", + "LazyData": "yes", + "NeedsCompilation": "yes", + "Author": "Xavier Robin [cre, aut] (), Natacha Turck [aut], Alexandre Hainard [aut], Natalia Tiberti [aut], Frédérique Lisacek [aut], Jean-Charles Sanchez [aut], Markus Müller [aut], Stefan Siegert [ctb] (Fast DeLong code), Matthias Doering [ctb] (Hand & Till Multiclass), Zane Billings [ctb] (DeLong paired test CI)", + "Maintainer": "Xavier Robin ", + "Repository": "CRAN" + }, "parallelly": { "Package": "parallelly", "Version": "1.43.0", @@ -3987,6 +4603,43 @@ "NeedsCompilation": "no", "Repository": "CRAN" }, + "plyr": { + "Package": "plyr", + "Version": "1.8.9", + "Source": "Repository", + "Title": "Tools for Splitting, Applying and Combining Data", + "Authors@R": "person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\"))", + "Description": "A set of tools that solves a common set of problems: you need to break a big problem down into manageable pieces, operate on each piece and then put all the pieces back together. For example, you might want to fit a model to each spatial location or time point in your study, summarise data by panels or collapse high-dimensional arrays to simpler summary statistics. The development of 'plyr' has been generously supported by 'Becton Dickinson'.", + "License": "MIT + file LICENSE", + "URL": "http://had.co.nz/plyr, https://github.com/hadley/plyr", + "BugReports": "https://github.com/hadley/plyr/issues", + "Depends": [ + "R (>= 3.1.0)" + ], + "Imports": [ + "Rcpp (>= 0.11.0)" + ], + "Suggests": [ + "abind", + "covr", + "doParallel", + "foreach", + "iterators", + "itertools", + "tcltk", + "testthat" + ], + "LinkingTo": [ + "Rcpp" + ], + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "yes", + "Author": "Hadley Wickham [aut, cre]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" + }, "png": { "Package": "png", "Version": "0.1-8", @@ -4069,6 +4722,37 @@ "Maintainer": "Gábor Csárdi ", "Repository": "CRAN" }, + "prodlim": { + "Package": "prodlim", + "Version": "2024.06.25", + "Source": "Repository", + "Title": "Product-Limit Estimation for Censored Event History Analysis", + "Author": "Thomas A. Gerds", + "Description": "Fast and user friendly implementation of nonparametric estimators for censored event history (survival) analysis. Kaplan-Meier and Aalen-Johansen method.", + "Depends": [ + "R (>= 2.9.0)" + ], + "Imports": [ + "Rcpp (>= 0.11.5)", + "stats", + "data.table", + "grDevices", + "graphics", + "diagram", + "survival", + "KernSmooth", + "lava" + ], + "LinkingTo": [ + "Rcpp" + ], + "Maintainer": "Thomas A. Gerds ", + "BugReports": "https://github.com/tagteam/prodlim/issues", + "License": "GPL (>= 2)", + "RoxygenNote": "7.3.1", + "NeedsCompilation": "yes", + "Repository": "CRAN" + }, "progress": { "Package": "progress", "Version": "1.2.3", @@ -4102,6 +4786,53 @@ "Maintainer": "Gábor Csárdi ", "Repository": "CRAN" }, + "progressr": { + "Package": "progressr", + "Version": "0.15.1", + "Source": "Repository", + "Title": "An Inclusive, Unifying API for Progress Updates", + "Description": "A minimal, unifying API for scripts and packages to report progress updates from anywhere including when using parallel processing. The package is designed such that the developer can to focus on what progress should be reported on without having to worry about how to present it. The end user has full control of how, where, and when to render these progress updates, e.g. in the terminal using utils::txtProgressBar(), cli::cli_progress_bar(), in a graphical user interface using utils::winProgressBar(), tcltk::tkProgressBar() or shiny::withProgress(), via the speakers using beepr::beep(), or on a file system via the size of a file. Anyone can add additional, customized, progression handlers. The 'progressr' package uses R's condition framework for signaling progress updated. Because of this, progress can be reported from almost anywhere in R, e.g. from classical for and while loops, from map-reduce API:s like the lapply() family of functions, 'purrr', 'plyr', and 'foreach'. It will also work with parallel processing via the 'future' framework, e.g. future.apply::future_lapply(), furrr::future_map(), and 'foreach' with 'doFuture'. The package is compatible with Shiny applications.", + "Authors@R": "c(person(\"Henrik\", \"Bengtsson\", role = c(\"aut\", \"cre\", \"cph\"), email = \"henrikb@braju.com\", comment = c(ORCID = \"0000-0002-7579-5165\")))", + "License": "GPL (>= 3)", + "Depends": [ + "R (>= 3.5.0)" + ], + "Imports": [ + "digest", + "utils" + ], + "Suggests": [ + "graphics", + "tcltk", + "beepr", + "cli", + "crayon", + "pbmcapply", + "progress", + "purrr", + "foreach", + "plyr", + "doFuture", + "future", + "future.apply", + "furrr", + "ntfy", + "RPushbullet", + "rstudioapi", + "shiny", + "commonmark", + "base64enc", + "tools" + ], + "VignetteBuilder": "progressr", + "URL": "https://progressr.futureverse.org, https://github.com/futureverse/progressr", + "BugReports": "https://github.com/futureverse/progressr/issues", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "no", + "Author": "Henrik Bengtsson [aut, cre, cph] ()", + "Maintainer": "Henrik Bengtsson ", + "Repository": "CRAN" + }, "promises": { "Package": "promises", "Version": "1.3.2", @@ -4475,6 +5206,77 @@ "Maintainer": "Jennifer Bryan ", "Repository": "CRAN" }, + "recipes": { + "Package": "recipes", + "Version": "1.2.1", + "Source": "Repository", + "Title": "Preprocessing and Feature Engineering Steps for Modeling", + "Authors@R": "c( person(\"Max\", \"Kuhn\", , \"max@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Emil\", \"Hvitfeldt\", , \"emil.hvitfeldt@posit.co\", role = \"aut\"), person(given = \"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "A recipe prepares your data for modeling. We provide an extensible framework for pipeable sequences of feature engineering steps provides preprocessing tools to be applied to data. Statistical parameters for the steps can be estimated from an initial data set and then applied to other data sets. The resulting processed output can then be used as inputs for statistical or machine learning models.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/tidymodels/recipes, https://recipes.tidymodels.org/", + "BugReports": "https://github.com/tidymodels/recipes/issues", + "Depends": [ + "dplyr (>= 1.1.0)", + "R (>= 3.6)" + ], + "Imports": [ + "cli", + "clock (>= 0.6.1)", + "generics (>= 0.1.2)", + "glue", + "gower", + "hardhat (>= 1.4.1)", + "ipred (>= 0.9-12)", + "lifecycle (>= 1.0.3)", + "lubridate (>= 1.8.0)", + "magrittr", + "Matrix", + "purrr (>= 1.0.0)", + "rlang (>= 1.1.0)", + "sparsevctrs (>= 0.3.0)", + "stats", + "tibble", + "tidyr (>= 1.0.0)", + "tidyselect (>= 1.2.0)", + "timeDate", + "utils", + "vctrs (>= 0.5.0)", + "withr" + ], + "Suggests": [ + "covr", + "ddalpha", + "dials (>= 1.2.0)", + "ggplot2", + "igraph", + "kernlab", + "knitr", + "methods", + "modeldata (>= 0.1.1)", + "parsnip (>= 1.2.0)", + "RANN", + "RcppRoll", + "rmarkdown", + "rpart", + "rsample", + "RSpectra", + "splines2", + "testthat (>= 3.0.0)", + "workflows", + "xml2" + ], + "VignetteBuilder": "knitr", + "RdMacros": "lifecycle", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "no", + "Author": "Max Kuhn [aut, cre], Hadley Wickham [aut], Emil Hvitfeldt [aut], Posit Software, PBC [cph, fnd]", + "Maintainer": "Max Kuhn ", + "Repository": "CRAN" + }, "rematch": { "Package": "rematch", "Version": "2.0.0", @@ -4625,6 +5427,39 @@ "Maintainer": "Jennifer Bryan ", "Repository": "CRAN" }, + "reshape2": { + "Package": "reshape2", + "Version": "1.4.4", + "Source": "Repository", + "Title": "Flexibly Reshape Data: A Reboot of the Reshape Package", + "Author": "Hadley Wickham ", + "Maintainer": "Hadley Wickham ", + "Description": "Flexibly restructure and aggregate data using just two functions: melt and 'dcast' (or 'acast').", + "License": "MIT + file LICENSE", + "URL": "https://github.com/hadley/reshape", + "BugReports": "https://github.com/hadley/reshape/issues", + "Depends": [ + "R (>= 3.1)" + ], + "Imports": [ + "plyr (>= 1.8.1)", + "Rcpp", + "stringr" + ], + "Suggests": [ + "covr", + "lattice", + "testthat (>= 0.8.0)" + ], + "LinkingTo": [ + "Rcpp" + ], + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.1.0", + "NeedsCompilation": "yes", + "Repository": "CRAN" + }, "rlang": { "Package": "rlang", "Version": "1.1.5", @@ -4771,6 +5606,34 @@ "Author": "Dewey Dunnington [aut, cre] (ORCID: ), Timothée Giraud [ctb]", "Repository": "CRAN" }, + "rpart": { + "Package": "rpart", + "Version": "4.1.23", + "Source": "Repository", + "Priority": "recommended", + "Date": "2023-12-04", + "Authors@R": "c(person(\"Terry\", \"Therneau\", role = \"aut\", email = \"therneau@mayo.edu\"), person(\"Beth\", \"Atkinson\", role = c(\"aut\", \"cre\"), email = \"atkinson@mayo.edu\"), person(\"Brian\", \"Ripley\", role = \"trl\", email = \"ripley@stats.ox.ac.uk\", comment = \"producer of the initial R port, maintainer 1999-2017\"))", + "Description": "Recursive partitioning for classification, regression and survival trees. An implementation of most of the functionality of the 1984 book by Breiman, Friedman, Olshen and Stone.", + "Title": "Recursive Partitioning and Regression Trees", + "Depends": [ + "R (>= 2.15.0)", + "graphics", + "stats", + "grDevices" + ], + "Suggests": [ + "survival" + ], + "License": "GPL-2 | GPL-3", + "LazyData": "yes", + "ByteCompile": "yes", + "NeedsCompilation": "yes", + "Author": "Terry Therneau [aut], Beth Atkinson [aut, cre], Brian Ripley [trl] (producer of the initial R port, maintainer 1999-2017)", + "Maintainer": "Beth Atkinson ", + "Repository": "CRAN", + "URL": "https://github.com/bethatkinson/rpart, https://cran.r-project.org/package=rpart", + "BugReports": "https://github.com/bethatkinson/rpart/issues" + }, "rprojroot": { "Package": "rprojroot", "Version": "2.0.4", @@ -5171,6 +6034,26 @@ "Maintainer": "David Cooley ", "Repository": "CRAN" }, + "shape": { + "Package": "shape", + "Version": "1.4.6.1", + "Source": "Repository", + "Title": "Functions for Plotting Graphical Shapes, Colors", + "Author": "Karline Soetaert ", + "Maintainer": "Karline Soetaert ", + "Depends": [ + "R (>= 2.01)" + ], + "Imports": [ + "stats", + "graphics", + "grDevices" + ], + "Description": "Functions for plotting graphical shapes such as ellipses, circles, cylinders, arrows, ...", + "License": "GPL (>= 3)", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, "shiny": { "Package": "shiny", "Version": "1.10.0", @@ -5369,6 +6252,43 @@ "NeedsCompilation": "no", "Author": "Glenn Davis [aut, cre]" }, + "sparsevctrs": { + "Package": "sparsevctrs", + "Version": "0.3.2", + "Source": "Repository", + "Title": "Sparse Vectors for Use in Data Frames", + "Authors@R": "c( person(\"Emil\", \"Hvitfeldt\", , \"emil.hvitfeldt@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-0679-1945\")), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "Provides sparse vectors powered by ALTREP (Alternative Representations for R Objects) that behave like regular vectors, and can thus be used in data frames. Also provides tools to convert between sparse matrices and data frames with sparse columns and functions to interact with sparse vectors.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/r-lib/sparsevctrs, https://r-lib.github.io/sparsevctrs/", + "BugReports": "https://github.com/r-lib/sparsevctrs/issues", + "Depends": [ + "R (>= 4.0.0)" + ], + "Imports": [ + "cli (>= 3.4.0)", + "rlang (>= 1.1.0)", + "vctrs" + ], + "Suggests": [ + "knitr", + "Matrix", + "methods", + "rmarkdown", + "testthat (>= 3.0.0)", + "tibble", + "withr" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate, rmarkdown, lobstr, ggplot2, bench, tidyr, ggbeeswarm", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "Emil Hvitfeldt [aut, cre] (), Davis Vaughan [ctb], Posit Software, PBC [cph, fnd]", + "Maintainer": "Emil Hvitfeldt ", + "Repository": "CRAN" + }, "spdep": { "Package": "spdep", "Version": "1.4-1", @@ -5608,6 +6528,36 @@ "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, + "survival": { + "Package": "survival", + "Version": "3.7-0", + "Source": "Repository", + "Title": "Survival Analysis", + "Priority": "recommended", + "Date": "2024-06-01", + "Depends": [ + "R (>= 3.5.0)" + ], + "Imports": [ + "graphics", + "Matrix", + "methods", + "splines", + "stats", + "utils" + ], + "LazyData": "Yes", + "LazyDataCompression": "xz", + "ByteCompile": "Yes", + "Authors@R": "c(person(c(\"Terry\", \"M\"), \"Therneau\", email=\"therneau.terry@mayo.edu\", role=c(\"aut\", \"cre\")), person(\"Thomas\", \"Lumley\", role=c(\"ctb\", \"trl\"), comment=\"original S->R port and R maintainer until 2009\"), person(\"Atkinson\", \"Elizabeth\", role=\"ctb\"), person(\"Crowson\", \"Cynthia\", role=\"ctb\"))", + "Description": "Contains the core survival analysis routines, including definition of Surv objects, Kaplan-Meier and Aalen-Johansen (multi-state) curves, Cox models, and parametric accelerated failure time models.", + "License": "LGPL (>= 2)", + "URL": "https://github.com/therneau/survival", + "NeedsCompilation": "yes", + "Author": "Terry M Therneau [aut, cre], Thomas Lumley [ctb, trl] (original S->R port and R maintainer until 2009), Atkinson Elizabeth [ctb], Crowson Cynthia [ctb]", + "Maintainer": "Terry M Therneau ", + "Repository": "CRAN" + }, "sys": { "Package": "sys", "Version": "3.4.3", @@ -5989,6 +6939,34 @@ "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, + "timeDate": { + "Package": "timeDate", + "Version": "4041.110", + "Source": "Repository", + "Title": "Rmetrics - Chronological and Calendar Objects", + "Authors@R": "c(person(\"Diethelm\", \"Wuertz\", role=\"aut\", comment = \"original code\") , person(\"Tobias\", \"Setz\", role = c(\"aut\"), email = \"tobias.setz@live.com\") , person(\"Yohan\", \"Chalabi\", role = \"aut\") , person(\"Martin\",\"Maechler\", role = \"ctb\", email = \"maechler@stat.math.ethz.ch\", comment = c(ORCID = \"0000-0002-8685-9910\")) , person(given = c(\"Joe\", \"W.\"), family = \"Byers\", role = \"ctb\") , person(given = c(\"Georgi\", \"N.\"), family = \"Boshnakov\", role = c(\"cre\", \"aut\"), email = \"georgi.boshnakov@manchester.ac.uk\") )", + "Description": "The 'timeDate' class fulfils the conventions of the ISO 8601 standard as well as of the ANSI C and POSIX standards. Beyond these standards it provides the \"Financial Center\" concept which allows to handle data records collected in different time zones and mix them up to have always the proper time stamps with respect to your personal financial center, or alternatively to the GMT reference time. It can thus also handle time stamps from historical data records from the same time zone, even if the financial centers changed day light saving times at different calendar dates.", + "Depends": [ + "R (>= 3.6.0)", + "methods" + ], + "Imports": [ + "graphics", + "utils", + "stats" + ], + "Suggests": [ + "RUnit" + ], + "License": "GPL (>= 2)", + "Encoding": "UTF-8", + "URL": "https://geobosh.github.io/timeDateDoc/ (doc), https://r-forge.r-project.org/scm/viewvc.php/pkg/timeDate/?root=rmetrics (devel), https://www.rmetrics.org", + "BugReports": "https://r-forge.r-project.org/projects/rmetrics", + "NeedsCompilation": "no", + "Author": "Diethelm Wuertz [aut] (original code), Tobias Setz [aut], Yohan Chalabi [aut], Martin Maechler [ctb] (), Joe W. Byers [ctb], Georgi N. Boshnakov [cre, aut]", + "Maintainer": "Georgi N. Boshnakov ", + "Repository": "CRAN" + }, "timechange": { "Package": "timechange", "Version": "0.3.0", @@ -6152,6 +7130,31 @@ "Maintainer": "Martijn Tennekes ", "Repository": "CRAN" }, + "twosamples": { + "Package": "twosamples", + "Version": "2.0.1", + "Source": "Repository", + "Type": "Package", + "Title": "Fast Permutation Based Two Sample Tests", + "Authors@R": "person(\"Connor\", \"Dowd\", , \"cd@codowd.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-9782-0931\"))", + "Description": "Fast randomization based two sample tests. Testing the hypothesis that two samples come from the same distribution using randomization to create p-values. Included tests are: Kolmogorov-Smirnov, Kuiper, Cramer-von Mises, Anderson-Darling, Wasserstein, and DTS. The default test (two_sample) is based on the DTS test statistic, as it is the most powerful, and thus most useful to most users. The DTS test statistic builds on the Wasserstein distance by using a weighting scheme like that of Anderson-Darling. See the companion paper at or for details of that test statistic, and non-standard uses of the package (parallel for big N, weighted observations, one sample tests, etc). We also include the permutation scheme to make test building simple for others.", + "License": "GPL (>= 2)", + "Encoding": "UTF-8", + "LinkingTo": [ + "cpp11" + ], + "RoxygenNote": "7.2.3", + "URL": "https://twosampletest.com, https://github.com/cdowd/twosamples", + "BugReports": "https://github.com/cdowd/twosamples/issues", + "Suggests": [ + "testthat (>= 3.0.0)" + ], + "Config/testthat/edition": "3", + "NeedsCompilation": "yes", + "Author": "Connor Dowd [aut, cre] ()", + "Maintainer": "Connor Dowd ", + "Repository": "CRAN" + }, "tzdb": { "Package": "tzdb", "Version": "0.5.0",