Commit graph

13 commits

Author SHA1 Message Date
Timon 6efcc8cfec Fix CI report pipeline: update tmap v4 syntax, add continuous color scales, fix formatting
- Updated all CI maps to use tm_scale_continuous() for proper tmap v4 compatibility
- Added fixed color scale limits (1-8 for CI, -3 to +3 for differences) for consistent field comparison
- Fixed YAML header formatting issues in CI_report_dashboard_planet.Rmd
- Positioned RGB map before CI overview map as requested
- Removed all obsolete use_breaks parameter references
- Enhanced error handling and logging throughout the pipeline
- Added new experimental analysis scripts and improvements to mosaic creation
2025-06-19 20:37:20 +02:00
Timon bb2a599075 Enhanced SmartCane executive summary report with explanatory text and fixed priority map coloring
Added explanatory text for all visualizations
Fixed priority map color scheme (red=high priority, green=low priority)
Improved error handling in farm health data calculations
Added fallback mechanisms for missing data
2025-04-23 09:47:19 +02:00
Timon 07aee7bed1 –[200~Improve CI report visualization and migrate to terra package
- Replace raster package with terra throughout the codebase
- Update map visualizations with better layout and legends
- Add descriptive headers to report sections
- Improve map legend positioning and sizing
- Enhance error handling for missing data
- Remove redundant legends in field-specific visualizations
- Optimize figure dimensions to prevent page overflow
- Expand documentation of CI index and report components
- Update package dependencies in packages.
2025-04-22 20:55:02 +02:00
Martin Folkerts 576250982c fixed plot colouring and made ci_extraction resilient against none file; 2024-11-11 20:55:59 +01:00
Martin Folkerts 7bf4f0930d added log as project file; 2024-08-30 16:16:26 +02:00
Martin Folkerts 7d671ba69c moved end_date and added a is.na wrapping to set when running in R_Studio 2024-08-30 10:37:02 +02:00
Timon 4dd84b10a5 source(utils) aangepast voor online versie 2024-08-30 09:52:02 +02:00
Timon 611bc17017 adjusted all functions and cleaned scripts 2024-08-29 16:35:59 +02:00
Martin Folkerts 64a576d638 okay 2024-08-20 17:01:58 +02:00
Martin Folkerts 3ea7eec68e some more work 2024-07-09 15:47:53 +02:00
Martin Folkerts 1f194c5670 wip 2024-07-01 13:39:21 +02:00
guillaume91 3f7043199b okay 2024-06-26 13:00:22 +02:00
guillaume91 ea38c952ba Split 2_CI_data_prep.R into 2 files (+3 utils files) 2024-06-26 12:07:21 +02:00