Timon
d075302efa
- Implemented `run_spectral_extraction.py` to batch extract spectral indices (NDVI, BSI, NDWI) from 4-band TIFF files, saving results in a structured CSV format. - Created `spectral_features.py` for calculating various spectral indices, including NDVI, BSI, NDWI, CI_green, CI_red, GNDVI, SAVI, and EVI2. - Added Jupyter notebook `02_season_normalization_analysis.ipynb` for analyzing season-length normalization, comparing ESA and Angata spectral indices, and visualizing growth patterns. - Included functions for computing season age, plotting trajectories, and performing peak and amplitude analysis.
89 lines
1.3 KiB
Plaintext
89 lines
1.3 KiB
Plaintext
# PHP (Laravel) Ignores
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#/laravel_app/vendor/
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#/laravel_app/.env
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.idea/
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# Python Ignores
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/python_app/__pycache__/
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/python_app/*.pyc
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__pycache__/
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*.pyc
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*.pyo
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# R Output Files
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*.Rout
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*.Rhistory
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*.RData
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*.Rdata
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.Rproj.user
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Rplots.pdf
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*.pdf
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# R Data Files
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*.rds
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!renv.lock
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# Data Files (Excel, CSV, Text)
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*.xlsx
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*.csv
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*.txt
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!python_app/requirements*.txt
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!PACKAGE_MANAGEMENT.md
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!README.md
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!LICENSE.txt
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# Spatial Data
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*.tif
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*.geojson
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!r_app/experiments/pivot.geojson
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# Generated Reports and Word Documents
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r_app/output/
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r_app/*.docx
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!r_app/word-styles-reference-var1.docx
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output/
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reports/
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*.docx
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# Experiment Outputs (temporary plots, analysis artifacts)
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python_app/harvest_detection_experiments/*/plots/
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python_app/harvest_detection_experiments/*/*.ipynb_checkpoints/
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# Cache Files
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rosm.cache/
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*.cache
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# Logs
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*.log
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package_manager.log
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# Laravel Storage (contains user data and outputs)
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laravel_app/storage/app/*/Data/
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laravel_app/storage/app/*/reports/
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/laravel_app/public/*
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!/laravel_app/public/.htaccess
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!/laravel_app/public/index.php
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!/laravel_app/public/robots.txt
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# R Environment (renv)
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renv/library/
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!renv/library/.gitkeep
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renv/local/
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renv/python/
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renv/staging/
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# Keep only these renv files
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!renv.lock
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!renv/activate.R
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!renv/settings.json
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!renv/.gitignore
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# IDE and OS
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.DS_Store
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.Rproj.user
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.idea/
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.vscode/
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# API Specific files
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.env
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tokens.json
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api/images |