Timon b2de819fc4 Fix backward compatibility: Support non-tiled (single-file) mosaic projects ... - Script 80: Add fallback logic to detect and handle single-file mosaics - Weekly stats utils: Support both tile-based and single-file mosaic detection - Pipeline runner: Auto-detect mosaic mode (tiled vs single-file) - Flexible grid size detection for tile-based projects (5x5, 10x10, etc) Fixes: - Script 80 now checks weekly_tile_max/{grid_size} first, falls back to weekly_mosaic - calculate_field_statistics handles both tile patterns and single-file patterns - run_full_pipeline detects project mode automatically - All verification checks are now flexible and don't assume fixed paths Projects like 'aura' (small ROI < 10km) will use single-file approach automatically Projects like 'angata' (large ROI >= 10km) will use tile-based approach automatically		2026-01-28 11:19:07 +01:00
..
experiments	Move experimental files to r_app/experiments	2026-01-14 11:07:40 +01:00
old_scripts	Move: archive old KPI scripts (09, 09b, 09c, 20) to old_scripts/ for testing	2026-01-14 11:37:13 +01:00
system_architecture	Refactor: Update system architecture documentation to reflect Python integration and add complete pipeline overview	2026-01-15 10:25:38 +01:00
.gitignore	updated harvest datata stadnadr	2024-03-14 13:00:02 +01:00
10_create_master_grid_and_split_tiffs.R	Refactor full pipeline script to include intelligent checking of existing outputs and dynamic execution of scripts. Added new Python scripts for RGB validation and evaluation template creation. Enhanced error handling and logging throughout the pipeline.	2026-01-27 08:58:06 +01:00
20_ci_extraction.R	Refactor full pipeline script to include intelligent checking of existing outputs and dynamic execution of scripts. Added new Python scripts for RGB validation and evaluation template creation. Enhanced error handling and logging throughout the pipeline.	2026-01-27 08:58:06 +01:00
20_ci_extraction_utils.R	Cleanup: Fix CI formula, reorganize shell scripts and test files	2026-01-14 16:58:51 +01:00
21_convert_ci_rds_to_csv.R	Rename: align stage numbering with Bitbucket structure	2026-01-14 11:08:33 +01:00
30_growth_model_utils.R	Rename: number utils to match their main scripts	2026-01-14 11:16:23 +01:00
30_interpolate_growth_model.R	Refactor full pipeline script to include intelligent checking of existing outputs and dynamic execution of scripts. Added new Python scripts for RGB validation and evaluation template creation. Enhanced error handling and logging throughout the pipeline.	2026-01-27 08:58:06 +01:00
40_mosaic_creation.R	working on visualisation, not working too well...	2026-01-18 11:25:31 +01:00
40_mosaic_creation_tile_utils.R	Rename: number utils to match their main scripts	2026-01-14 11:16:23 +01:00
40_mosaic_creation_utils.R	Enhance harvest detection logic and testing framework	2026-01-15 14:30:54 +01:00
80_calculate_kpis.R	Fix backward compatibility: Support non-tiled (single-file) mosaic projects	2026-01-28 11:19:07 +01:00
80_report_building_utils.R	updateing csv file	2026-01-20 12:06:45 +01:00
80_weekly_stats_utils.R	Fix backward compatibility: Support non-tiled (single-file) mosaic projects	2026-01-28 11:19:07 +01:00
90_CI_report_with_kpis_simple.Rmd	Rename: align stage numbering with Bitbucket structure	2026-01-14 11:10:28 +01:00
91_CI_report_with_kpis_Angata.Rmd	updated whole workflow and architercutre md	2026-01-12 09:34:13 +01:00
CI_graph_example.png	Add KPI reporting system and deployment documentation	2025-10-14 11:49:30 +02:00
extract_rds_only.R	commit all stuff	2026-01-06 14:17:37 +01:00
kpi_utils.R	commit all stuff	2026-01-06 14:17:37 +01:00
parameters_project.R	Enhance harvest detection logic and testing framework	2026-01-15 14:30:54 +01:00
report_utils.R	Cleanup: Fix CI formula, reorganize shell scripts and test files	2026-01-14 16:58:51 +01:00
run_full_pipeline.R	Fix backward compatibility: Support non-tiled (single-file) mosaic projects	2026-01-28 11:19:07 +01:00