Timon
d5fd4bb463
Major Changes: - NEW: Scripts 09 & 10 for KPI calculation and enhanced reporting - NEW: Shell script wrappers (01-10) for easier execution - NEW: R packages flextable and officer for enhanced Word reports - NEW: DEPLOYMENT_README.md with complete deployment guide - RENAMED: Numbered R scripts (02, 03, 04) for clarity - REMOVED: Old package management scripts (using renv only) - UPDATED: Workflow now uses scripts 09->10 instead of 05 Files Changed: 90+ files New Packages: flextable, officer New Scripts: 09_run_calculate_kpis.sh, 10_run_kpi_report.sh Documentation: DEPLOYMENT_README.md, EMAIL_TO_ADMIN.txt See DEPLOYMENT_README.md for full deployment instructions.
57 lines
2 KiB
Bash
57 lines
2 KiB
Bash
#!/bin/bash
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# Run CI report with KPIs (10_CI_report_with_kpis_simple.Rmd)
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# Usage: ./10_run_kpi_report.sh --filename=<output.docx> --report_date=<YYYY-MM-DD> --mail_day=<day> --data_dir=<project> --borders=<TRUE|FALSE> --ci_plot_type=<both|absolute|cumulative> --colorblind_friendly=<TRUE|FALSE> --facet_by_season=<TRUE|FALSE> --x_axis_unit=<days|weeks>
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filename="CI_report_with_kpis.docx"
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report_date="$(date +%Y-%m-%d)"
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mail_day="Monday"
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data_dir="aura"
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borders="FALSE"
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ci_plot_type="both"
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colorblind_friendly="TRUE"
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facet_by_season="FALSE"
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x_axis_unit="days"
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for arg in "$@"; do
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case $arg in
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--filename=*)
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filename="${arg#*=}"
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;;
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--report_date=*)
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report_date="${arg#*=}"
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;;
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--mail_day=*)
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mail_day="${arg#*=}"
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;;
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--data_dir=*)
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data_dir="${arg#*=}"
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;;
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--borders=*)
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borders="${arg#*=}"
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;;
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--ci_plot_type=*)
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ci_plot_type="${arg#*=}"
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;;
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--colorblind_friendly=*)
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colorblind_friendly="${arg#*=}"
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;;
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--facet_by_season=*)
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facet_by_season="${arg#*=}"
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;;
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--x_axis_unit=*)
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x_axis_unit="${arg#*=}"
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;;
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*)
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echo "Unknown option: $arg"
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exit 1
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;;
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esac
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shift
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done
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echo "Running CI report with KPIs for $data_dir, report date $report_date, mail day $mail_day."
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echo "Parameters: borders=$borders, ci_plot_type=$ci_plot_type, colorblind=$colorblind_friendly, facet_by_season=$facet_by_season, x_axis_unit=$x_axis_unit"
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cd r_app
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Rscript -e "rmarkdown::render('10_CI_report_with_kpis_simple.Rmd', output_file='$filename', params=list(report_date='$report_date', mail_day='$mail_day', data_dir='$data_dir', borders='$borders', ci_plot_type='$ci_plot_type', colorblind_friendly='$colorblind_friendly', facet_by_season='$facet_by_season', x_axis_unit='$x_axis_unit'))"
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cd ..
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