Martin Folkerts
a316b30afc
Merge branch 'code-improvements'
2025-06-24 09:58:56 +02:00
Timon
6efcc8cfec
Fix CI report pipeline: update tmap v4 syntax, add continuous color scales, fix formatting
...
- Updated all CI maps to use tm_scale_continuous() for proper tmap v4 compatibility
- Added fixed color scale limits (1-8 for CI, -3 to +3 for differences) for consistent field comparison
- Fixed YAML header formatting issues in CI_report_dashboard_planet.Rmd
- Positioned RGB map before CI overview map as requested
- Removed all obsolete use_breaks parameter references
- Enhanced error handling and logging throughout the pipeline
- Added new experimental analysis scripts and improvements to mosaic creation
2025-06-19 20:37:20 +02:00
Martin Folkerts
c118feb8a2
Kernel.php edited online with Bitbucket
2025-06-18 08:22:43 +00:00
Timon
bb2a599075
Enhanced SmartCane executive summary report with explanatory text and fixed priority map coloring
...
Added explanatory text for all visualizations
Fixed priority map color scheme (red=high priority, green=low priority)
Improved error handling in farm health data calculations
Added fallback mechanisms for missing data
2025-04-23 09:47:19 +02:00
Timon
2bed5949fa
Refactor CI plotting functions to use proper parameterization
...
- Refactored ci_plot and cum_ci_plot functions to accept explicit parameters
- Added default values for backward compatibility
- Updated CI_report_dashboard_planet.Rmd to pass explicit parameters
- Added input validation for better error handling
- Added parameter documentation in function headers
- Removed reliance on global variables for better maintainability
2025-04-22 21:41:18 +02:00
Timon
07aee7bed1
[200~Improve CI report visualization and migrate to terra package
...
- Replace raster package with terra throughout the codebase
- Update map visualizations with better layout and legends
- Add descriptive headers to report sections
- Improve map legend positioning and sizing
- Enhance error handling for missing data
- Remove redundant legends in field-specific visualizations
- Optimize figure dimensions to prevent page overflow
- Expand documentation of CI index and report components
- Update package dependencies in packages.
2025-04-22 20:55:02 +02:00
Timon
fbc8f5e11b
wip
2025-04-22 17:43:11 +02:00
Martin Folkerts
aedca761f8
Updated Timeout settings for ProjectDownloadRDSJob
2025-04-09 07:45:51 +00:00
Martin Folkerts
eb9803fbf1
Removed yieldprediction from CI_report_dashboard_planet.Rmd edited online with Bitbucket
2025-04-02 12:53:29 +00:00
Martin Folkerts
fb2e94c52a
added method to convert projectname to valid dir name;
2025-03-26 20:42:37 +01:00
Martin Folkerts
ddad4240d5
added conditional to not run prediction if requirements are not met
2025-03-25 16:09:31 +01:00
Timon
29e2867b41
adding docx
2025-03-25 10:42:04 +01:00
Martin Folkerts
dd1ee2b1a0
adjusted dates to iso dates
2025-01-07 14:24:38 +01:00
Martin Folkerts
4db80688ca
adjusted dates to iso dates
2025-01-07 14:24:13 +01:00
Timon
d0ff25acf9
timely save
2024-12-16 16:26:34 +01:00
Martin Folkerts
9b29dc4d57
updated signature of cum ci plot
2024-12-03 09:32:04 +01:00
Martin Folkerts
3bfa7e1750
some update to get mkulazi to work
2024-11-18 13:41:58 +01:00
Martin Folkerts
576250982c
fixed plot colouring and made ci_extraction resilient against none file;
2024-11-11 20:55:59 +01:00
Martin Folkerts
c8ef406545
added Catalog package with config and changed iteration to use available_slots
2024-11-11 10:26:02 +01:00
Martin Folkerts
c131b18cec
added source from cleanup sentinal Code branch
2024-11-07 11:48:23 +01:00
Martin Folkerts
db68fd8e83
removed column for plot colors
2024-11-07 11:43:09 +01:00
Timon
119084ec41
only download images on dates with actual data, not empty dates
2024-11-01 17:04:17 +01:00
Martin Folkerts
3093c86e3a
okay
2024-10-31 22:35:59 +01:00
Timon
c1a32bf6ad
Refactor cum_ci_plot function for enhanced plotting options; added parameters for plot type and season filtering; improved x-axis labeling and updated ggplot aesthetics. Also, continued work on yield prediction in R.
2024-10-31 11:21:39 +01:00
Martin Folkerts
ddb4fdbc02
updated date format for excel
2024-10-28 15:57:23 +01:00
Martin Folkerts
f08da04c3b
added DownloadCreditsCommand some updates
2024-10-23 09:34:52 +02:00
Martin Folkerts
e51e8d7312
wip
2024-09-17 15:03:33 +02:00
Martin Folkerts
37be63d6cb
replaced orderBy with sortBy
2024-09-17 15:01:04 +02:00
Martin Folkerts
056b8dd67b
okay
2024-09-17 14:56:33 +02:00
Martin Folkerts
22222990b6
added report-not-found email
2024-09-10 11:53:31 +02:00
Martin Folkerts
741f195a24
added downloads counter and stats for reports
2024-09-09 14:18:16 +02:00
Martin Folkerts
287c8c192c
okay
2024-09-09 11:20:54 +02:00
Martin Folkerts
b33bb0defa
added a distinct name to the route
2024-09-09 11:13:46 +02:00
Martin Folkerts
3e773b1386
added attachment as link
2024-09-09 10:52:39 +02:00
Martin Folkerts
77633af429
added analyser for pivot names in harvest file and pivot.geojson
2024-09-03 14:14:33 +02:00
Martin Folkerts
2863c9a657
added a failed status when empty mosaic is create;
2024-09-02 11:51:12 +02:00
Martin Folkerts
38d0371381
added state to logs menu link
2024-08-30 17:16:07 +02:00
Martin Folkerts
5c1a320b17
added log download to user interface
2024-08-30 17:13:48 +02:00
Martin Folkerts
4beca30d2e
okay
2024-08-30 16:27:32 +02:00
Martin Folkerts
7bf4f0930d
added log as project file;
2024-08-30 16:16:26 +02:00
Martin Folkerts
499744db6d
moved logging arroudn
2024-08-30 12:09:13 +02:00
Martin Folkerts
7d671ba69c
moved end_date and added a is.na wrapping to set when running in R_Studio
2024-08-30 10:37:02 +02:00
Timon
4dd84b10a5
source(utils) aangepast voor online versie
2024-08-30 09:52:02 +02:00
Timon
bd9b7d4ab0
adjusted all functions and cleaned scripts incl rmd file
2024-08-29 16:48:24 +02:00
Timon
611bc17017
adjusted all functions and cleaned scripts
2024-08-29 16:35:59 +02:00
Martin Folkerts
ad2f41482f
updated create_report.sh to have borders option
2024-08-28 14:52:42 +02:00
Martin Folkerts
f6c05a89fe
added border setting to project and changed plotting strategy in Rmd
2024-08-28 14:34:47 +02:00
Martin Folkerts
2598306643
removed chemba as a option from parameters so it is treathed as a regular project
2024-08-28 10:18:53 +02:00
Martin Folkerts
23ba088434
added logging to getTifsAsZip
2024-08-27 11:46:34 +02:00
Martin Folkerts
509f924c58
me
2024-08-26 16:23:52 +02:00
Timon